annotate test/SbpOperators/volumeops/derivatives/second_derivative_test.jl @ 1726:471a948cd2b2 rename_module

Rename project from Sbplib to Diffinitive
author Vidar Stiernström <vidar.stiernstrom@gmail.com>
date Sat, 07 Sep 2024 12:11:53 -0700
parents 43aaf710463e
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
1 using Test
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
2
1726
471a948cd2b2 Rename project from Sbplib to Diffinitive
Vidar Stiernström <vidar.stiernstrom@gmail.com>
parents: 1529
diff changeset
3 using Diffinitive.SbpOperators
471a948cd2b2 Rename project from Sbplib to Diffinitive
Vidar Stiernström <vidar.stiernstrom@gmail.com>
parents: 1529
diff changeset
4 using Diffinitive.Grids
471a948cd2b2 Rename project from Sbplib to Diffinitive
Vidar Stiernström <vidar.stiernstrom@gmail.com>
parents: 1529
diff changeset
5 using Diffinitive.LazyTensors
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
6
1726
471a948cd2b2 Rename project from Sbplib to Diffinitive
Vidar Stiernström <vidar.stiernstrom@gmail.com>
parents: 1529
diff changeset
7 import Diffinitive.SbpOperators.VolumeOperator
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
8
1158
c94a12327737 Disregard review comments about multi-d tests.
Jonatan Werpers <jonatan@werpers.com>
parents: 1153
diff changeset
9 # TODO: Refactor these test to look more like the tests in first_derivative_test.jl.
c94a12327737 Disregard review comments about multi-d tests.
Jonatan Werpers <jonatan@werpers.com>
parents: 1153
diff changeset
10
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
11 @testset "SecondDerivative" begin
964
2ae62dbaf839 Add method for creating second derivative from a stencil set.
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 781
diff changeset
12 operator_path = sbp_operators_path()*"standard_diagonal.toml"
1018
5ec49dd2c7c4 Reintroduce read_stencil_set
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 990
diff changeset
13 stencil_set = read_stencil_set(operator_path; order=4)
781
d2f4ac2be47f Fix derivatives tests
Jonatan Werpers <jonatan@werpers.com>
parents: 776
diff changeset
14 inner_stencil = parse_stencil(stencil_set["D2"]["inner_stencil"])
d2f4ac2be47f Fix derivatives tests
Jonatan Werpers <jonatan@werpers.com>
parents: 776
diff changeset
15 closure_stencils = parse_stencil.(stencil_set["D2"]["closure_stencils"])
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
16 Lx = 3.5
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
17 Ly = 3.
1529
43aaf710463e Change to signature of equidistant_grid to same style as many array methods.
Jonatan Werpers <jonatan@werpers.com>
parents: 1291
diff changeset
18 g_1D = equidistant_grid(0.0, Lx, 121)
43aaf710463e Change to signature of equidistant_grid to same style as many array methods.
Jonatan Werpers <jonatan@werpers.com>
parents: 1291
diff changeset
19 g_2D = equidistant_grid((0.0, 0.0), (Lx, Ly), 121, 123)
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
20
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
21 @testset "Constructors" begin
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
22 @testset "1D" begin
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
23 Dₓₓ = second_derivative(g_1D, stencil_set)
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
24 @test Dₓₓ == second_derivative(g_1D, inner_stencil, closure_stencils)
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
25 @test Dₓₓ isa LazyTensor{Float64,1,1}
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
26 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
27 @testset "2D" begin
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
28 Dₓₓ = second_derivative(g_2D,stencil_set,1)
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
29 @test Dₓₓ isa LazyTensor{Float64,2,2}
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
30 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
31 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
32
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
33 # Exact differentiation is measured point-wise. In other cases
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
34 # the error is measured in the l2-norm.
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
35 @testset "Accuracy" begin
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
36 @testset "1D" begin
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
37 l2(v) = sqrt(spacing(g_1D)[1]*sum(v.^2));
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
38 monomials = ()
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
39 maxOrder = 4;
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
40 for i = 0:maxOrder-1
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
41 f_i(x) = 1/factorial(i)*x^i
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
42 monomials = (monomials...,eval_on(g_1D,f_i))
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
43 end
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
44 v = eval_on(g_1D,x -> sin(x))
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
45 vₓₓ = eval_on(g_1D,x -> -sin(x))
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
46
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
47 # 2nd order interior stencil, 1nd order boundary stencil,
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
48 # implies that L*v should be exact for monomials up to order 2.
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
49 @testset "2nd order" begin
1018
5ec49dd2c7c4 Reintroduce read_stencil_set
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 990
diff changeset
50 stencil_set = read_stencil_set(operator_path; order=2)
990
b6238afd3bb0 Add methods for creating derivative operators in 1D from stencil sets without providing directions
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 989
diff changeset
51 Dₓₓ = second_derivative(g_1D,stencil_set)
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
52 @test Dₓₓ*monomials[1] ≈ zeros(Float64,size(g_1D)...) atol = 5e-10
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
53 @test Dₓₓ*monomials[2] ≈ zeros(Float64,size(g_1D)...) atol = 5e-10
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
54 @test Dₓₓ*monomials[3] ≈ monomials[1] atol = 5e-10
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
55 @test Dₓₓ*v ≈ vₓₓ rtol = 5e-2 norm = l2
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
56 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
57
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
58 # 4th order interior stencil, 2nd order boundary stencil,
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
59 # implies that L*v should be exact for monomials up to order 3.
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
60 @testset "4th order" begin
1018
5ec49dd2c7c4 Reintroduce read_stencil_set
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 990
diff changeset
61 stencil_set = read_stencil_set(operator_path; order=4)
990
b6238afd3bb0 Add methods for creating derivative operators in 1D from stencil sets without providing directions
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 989
diff changeset
62 Dₓₓ = second_derivative(g_1D,stencil_set)
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
63 # NOTE: high tolerances for checking the "exact" differentiation
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
64 # due to accumulation of round-off errors/cancellation errors?
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
65 @test Dₓₓ*monomials[1] ≈ zeros(Float64,size(g_1D)...) atol = 5e-10
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
66 @test Dₓₓ*monomials[2] ≈ zeros(Float64,size(g_1D)...) atol = 5e-10
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
67 @test Dₓₓ*monomials[3] ≈ monomials[1] atol = 5e-10
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
68 @test Dₓₓ*monomials[4] ≈ monomials[2] atol = 5e-10
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
69 @test Dₓₓ*v ≈ vₓₓ rtol = 5e-4 norm = l2
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
70 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
71 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
72
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
73 @testset "2D" begin
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
74 l2(v) = sqrt(prod(spacing.(g_2D.grids))*sum(v.^2));
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
75 binomials = ()
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
76 maxOrder = 4;
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
77 for i = 0:maxOrder-1
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
78 f_i(x,y) = 1/factorial(i)*y^i + x^i
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
79 binomials = (binomials...,eval_on(g_2D,f_i))
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
80 end
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
81 v = eval_on(g_2D, (x,y) -> sin(x)+cos(y))
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
82 v_yy = eval_on(g_2D,(x,y) -> -cos(y))
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
83
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
84 # 2nd order interior stencil, 1st order boundary stencil,
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
85 # implies that L*v should be exact for binomials up to order 2.
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
86 @testset "2nd order" begin
1018
5ec49dd2c7c4 Reintroduce read_stencil_set
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 990
diff changeset
87 stencil_set = read_stencil_set(operator_path; order=2)
990
b6238afd3bb0 Add methods for creating derivative operators in 1D from stencil sets without providing directions
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 989
diff changeset
88 Dyy = second_derivative(g_2D,stencil_set,2)
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
89 @test Dyy*binomials[1] ≈ zeros(Float64,size(g_2D)...) atol = 5e-9
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
90 @test Dyy*binomials[2] ≈ zeros(Float64,size(g_2D)...) atol = 5e-9
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
91 @test Dyy*binomials[3] ≈ eval_on(g_2D,(x,y)->1.) atol = 5e-9
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
92 @test Dyy*v ≈ v_yy rtol = 5e-2 norm = l2
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
93 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
94
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
95 # 4th order interior stencil, 2nd order boundary stencil,
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
96 # implies that L*v should be exact for binomials up to order 3.
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
97 @testset "4th order" begin
1018
5ec49dd2c7c4 Reintroduce read_stencil_set
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 990
diff changeset
98 stencil_set = read_stencil_set(operator_path; order=4)
990
b6238afd3bb0 Add methods for creating derivative operators in 1D from stencil sets without providing directions
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents: 989
diff changeset
99 Dyy = second_derivative(g_2D,stencil_set,2)
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
100 # NOTE: high tolerances for checking the "exact" differentiation
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
101 # due to accumulation of round-off errors/cancellation errors?
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
102 @test Dyy*binomials[1] ≈ zeros(Float64,size(g_2D)...) atol = 5e-9
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
103 @test Dyy*binomials[2] ≈ zeros(Float64,size(g_2D)...) atol = 5e-9
1291
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
104 @test Dyy*binomials[3] ≈ eval_on(g_2D,(x,y)->1.) atol = 5e-9
356ec6a72974 Implement changes in SbpOperators
Jonatan Werpers <jonatan@werpers.com>
parents: 1285
diff changeset
105 @test Dyy*binomials[4] ≈ eval_on(g_2D,(x,y)->y) atol = 5e-9
728
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
106 @test Dyy*v ≈ v_yy rtol = 5e-4 norm = l2
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
107 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
108 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
109 end
45966c77cb20 Split tests for SbpOperators over several files
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
110 end