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annotate src/SbpOperators/readoperator.jl @ 835:fc2ac236dd73 operator_storage_array_of_table

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Add a bunch of documentation
author Jonatan Werpers <jonatan@werpers.com>
date Thu, 13 Jan 2022 09:14:36 +0100
parents 760c11e81fd4
children 91a63b04b1c9
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594
cc86b920531a Change the readoperator function to use the .toml format
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1 using TOML
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2
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3 export read_stencil_set
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4 export get_stencil_set
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5
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6 export parse_stencil
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7 export parse_scalar
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8 export parse_tuple
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9
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10 export sbp_operators_path
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11
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12 # TODO: Think about naming and terminology around freshly parsed TOML. answer: toml_dict/parsed_toml?
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13
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14 # TODO: Docs for readoperator.jl
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15 # Parsing as rationals is intentional, allows preserving exactness, which can be lowered using converts or promotions later.
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16 # Documetning the format: Allows representing rationals as strings
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17 # TODO: Remove references to toml for dict-input arguments
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18
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19 """
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20 read_stencil_set(fn; filters)
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21
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22 Picks out a stencil set from the given toml file based on some key-value filters.
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23 If more than one set matches the filters an error is raised.
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24
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25 The stencil set is not parsed beyond the inital toml parse. To get usable
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26 stencils use the `parse_stencil` functions on the fields of the stencil set.
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27
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28 The reason for this is that since stencil sets are intended to be very
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29 general, and currently do not include any way to specify how to parse a given
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30 section, the exact parsing is left to the user.
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31
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32 See also [`sbp_operators_path`](@ref), [`get_stencil_set`](@ref), [`parse_stencil`](@ref), [`parse_scalar`](@ref), [`parse_tuple`](@ref),.
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33 """
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34 read_stencil_set(fn; filters...) = get_stencil_set(TOML.parsefile(fn); filters...)
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36 """
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37 get_stencil_set(parsed_toml; filters...)
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38
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39 Same as `read_stencil_set` but works on already parsed TOML.
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40
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41 See also [`read_stencil_set`](@ref).
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42 """
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43 function get_stencil_set(parsed_toml; filters...)
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44 matches = findall(parsed_toml["stencil_set"]) do set
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45 for (key, val) ∈ filters
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46 if set[string(key)] != val
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47 return false
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48 end
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49 end
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50
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51 return true
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52 end
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53
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54 if length(matches) != 1
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55 throw(ArgumentError("filters must pick out a single stencil set"))
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56 end
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57
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58 i = matches[1]
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59 return parsed_toml["stencil_set"][i]
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60 end
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61
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62 """
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63 parse_stencil(toml)
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64
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65 Accepts parsed toml and reads it as a stencil
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66
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67 See also [`read_stencil_set`](@ref), [`parse_scalar`](@ref), [`parse_tuple`](@ref).
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68 """
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69 function parse_stencil(toml)
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70 check_stencil_toml(toml)
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71
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72 if toml isa Array
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73 weights = parse_rational.(toml)
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74 return CenteredStencil(weights...)
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75 end
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76
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77 weights = parse_rational.(toml["s"])
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78 return Stencil(weights..., center = toml["c"])
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79 end
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80
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81 """
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82 parse_stencil(T, toml)
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83
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84 Parses the stencil with element type `T`
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85 """
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86 parse_stencil(T, toml) = Stencil{T}(parse_stencil(toml))
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87
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88 function check_stencil_toml(toml)
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89 if !(toml isa Dict || toml isa Vector{String})
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90 throw(ArgumentError("the TOML for a stencil must be a vector of strings or a table."))
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91 end
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92
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93 if toml isa Vector{String}
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94 return
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95 end
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96
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97 if !(haskey(toml, "s") && haskey(toml, "c"))
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98 throw(ArgumentError("the table form of a stencil must have fields `s` and `c`."))
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99 end
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100
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101 if !(toml["s"] isa Vector{String})
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102 throw(ArgumentError("a stencil must be specified as a vector of strings."))
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103 end
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104
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105 if !(toml["c"] isa Int)
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106 throw(ArgumentError("the center of a stencil must be specified as an integer."))
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107 end
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108 end
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109
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110 """
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111 parse_scalar(toml)
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112
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113 Parse a scalar, represented as a string or a number in the TOML, and return it as a `Rational`
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114
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115 See also [`read_stencil_set`](@ref), [`parse_stencil`](@ref) [`parse_tuple`](@ref).
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116 """
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117 function parse_scalar(toml)
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118 try
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119 return parse_rational(toml)
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120 catch e
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121 throw(ArgumentError("must be a number or a string representing a number."))
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122 end
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123 end
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124
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125 """
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126 parse_tuple(toml)
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127
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128 Parse `toml` as a tuple of scalars.
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129
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130 See also [`read_stencil_set`](@ref), [`parse_stencil`](@ref), [`parse_scalar`](@ref).
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131 """
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132 function parse_tuple(toml)
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133 if !(toml isa Array)
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134 throw(ArgumentError("argument must be an array"))
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135 end
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136 return Tuple(parse_scalar.(toml))
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137 end
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138
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139
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140 """
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141 parse_rational(toml)
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142
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143 Parse a string or a number as a rational.
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144 """
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145 function parse_rational(toml)
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146 if toml isa String
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147 expr = Meta.parse(replace(toml, "/"=>"//"))
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148 return eval(:(Rational($expr)))
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149 else
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150 return Rational(toml)
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151 end
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152 end
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153
835
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154 """
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155 sbp_operators_path()
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156
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157 Calculate the path for the operators folder with included stencil sets.
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158
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159 See also [`read_stencil_set`](@ref)
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160 """
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161 sbp_operators_path() = (@__DIR__) * "/operators/"