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annotate +rv/+time/RungekuttaExteriorRvBdf.m @ 1029:dce08a74e0ad feature/advectionRV

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Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
author Vidar Stiernström <vidar.stiernstrom@it.uu.se>
date Fri, 11 Jan 2019 15:47:10 +0100
parents
children 2ef20d00b386
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rev   line source
1029
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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diff changeset
1 classdef RungekuttaExteriorRvBdf < time.Timestepper
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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2 properties
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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3 F % RHS of the ODE
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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4 k % Time step
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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5 t % Time point
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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6 v % Solution vector
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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7 n % Time level
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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8 coeffs % The coefficents used for the RK time integration
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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9
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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10 % Properties related to the residual viscositys
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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11 RV % Residual Viscosity operator
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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12 viscosity % Viscosity vector
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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13 v_prev % Solution vector at previous time levels, used for the RV evaluation
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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14 DvDt % Function for computing the time deriative used for the RV evaluation
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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15 lowerBdfOrder % Orders of the approximation of the time deriative, used for the RV evaluation.
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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16 % dictates which accuracy the boot-strapping should start from.
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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17 upperBdfOrder % Orders of the approximation of the time deriative, used for the RV evaluation.
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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18 % Dictates the order of accuracy used once the boot-strapping is complete.
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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19
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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20 % Convenience properties. Only for plotting
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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21 residual
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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22 dvdt
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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23 Df
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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24 end
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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25 methods
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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26 function obj = RungekuttaExteriorRvBdf(F, k, t0, v0, RV, rkOrder, bdfOrders)
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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27 obj.F = F;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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28 obj.k = k;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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29 obj.t = t0;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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30 obj.v = v0;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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31 obj.n = 0;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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32 % Extract the coefficients for the specified rkOrder
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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33 % used for the RK updates from the Butcher tableua.
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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34 [s,a,b,c] = time.rk.butcherTableau(rkOrder);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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35 obj.coeffs = struct('s',s,'a',a,'b',b,'c',c);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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36
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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37 obj.RV = RV;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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38 % TBD: Decide on if the initialization of the previous stages used by
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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39 % the BDF should be done here, or if it should be checked for each
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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40 % step taken.
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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41 % If it is moved here, then multiple branching stages can be removed in step()
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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42 % but this will effectively result in a plotted simulation starting from n = upperBdfOrder.
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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43 % In addition, the properties lowerBdfOrder and upperBdfOrder can be removed.
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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44 obj.lowerBdfOrder = bdfOrders.lowerBdfOrder;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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45 obj.upperBdfOrder = bdfOrders.upperBdfOrder;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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46 assert((obj.lowerBdfOrder >= 1) && (obj.upperBdfOrder <= 6));
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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47 obj.v_prev = [];
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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48 obj.DvDt = rv.time.BdfDerivative();
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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49 obj.viscosity = zeros(size(v0));
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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50 obj.residual = zeros(size(v0));
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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51 obj.dvdt = zeros(size(v0));
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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52 obj.Df = zeros(size(v0));
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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53 end
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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54
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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55 function [v, t] = getV(obj)
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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56 v = obj.v;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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57 t = obj.t;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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58 end
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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59
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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60 function state = getState(obj)
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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61 state = struct('v', obj.v, 'residual', obj.residual, 'dvdt', obj.dvdt, 'Df', obj.Df, 'viscosity', obj.viscosity, 't', obj.t);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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62 end
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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63
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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64 function obj = step(obj)
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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65 % Store current time level and update v_prev
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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66 numStoredStages = size(obj.v_prev,2);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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67 if (numStoredStages < obj.upperBdfOrder)
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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68 obj.v_prev = [obj.v, obj.v_prev];
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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69 numStoredStages = numStoredStages+1;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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70 else
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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71 obj.v_prev(:,2:end) = obj.v_prev(:,1:end-1);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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72 obj.v_prev(:,1) = obj.v;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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73 end
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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74
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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75 % Fix the viscosity of the RHS function F
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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76 F_visc = @(v,t) obj.F(v,t,obj.viscosity);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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77 obj.v = time.rk.rungekutta(obj.v, obj.t, obj.k, F_visc, obj.coeffs);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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78 obj.t = obj.t + obj.k;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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79 obj.n = obj.n + 1;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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80
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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81 %Calculate dvdt and evaluate RV for the new time level
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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82 if ((numStoredStages >= obj.lowerBdfOrder) && (numStoredStages <= obj.upperBdfOrder))
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
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83 obj.dvdt = obj.DvDt.evaluate(obj.v, obj.v_prev, obj.k);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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84 [obj.viscosity, obj.Df] = obj.RV.evaluate(obj.v,obj.dvdt);
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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85 obj.residual = obj.dvdt + obj.Df;
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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86 end
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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87 end
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
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88 end
dce08a74e0ad Create a separate class of RungekuttaExteriorRV which uses BDFs for computing the time derivative. Remove BDFs from RungekuttaExteriorRV
Vidar Stiernström <vidar.stiernstrom@it.uu.se>
parents:
diff changeset
89 end