Mercurial > repos > public > sbplib
diff +scheme/bcSetup.m @ 797:5cf9fdf4c98f feature/poroelastic
Merge with feature/grids and bugfix bcSetup
author | Martin Almquist <malmquist@stanford.edu> |
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date | Thu, 26 Jul 2018 10:53:05 -0700 |
parents | 1f6b2fb69225 6afd3dd3ed96 |
children | 006defd0247b 57760d7088ad |
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--- a/+scheme/bcSetup.m Wed Jul 25 18:53:07 2018 -0700 +++ b/+scheme/bcSetup.m Thu Jul 26 10:53:05 2018 -0700 @@ -3,46 +3,108 @@ % Each bc is a struct with the fields % * type -- Type of boundary condition % * boundary -- Boundary identifier -% * data -- A function_handle with time and space coordinates as a parameters, for example f(t,x,y) for a 2D problem +% * data -- A function_handle for a function which provides boundary data.(see below) % Also takes S_sign which modifies the sign of S, [-1,1] -% Returns a closure matrix and a forcing function S -function [closure, S] = bcSetup(diffOp, bc, S_sign) +% Returns a closure matrix and a forcing function S. +% +% The boundary data function can either be a function of time or a function of time and space coordinates. +% In the case where it only depends on time it should return the data as grid function for the boundary. +% In the case where it also takes space coordinates the number of space coordinates should match the number of dimensions of the problem domain. +% For example in the 2D case: f(t,x,y). +function [closure, S] = bcSetup(diffOp, bcs, S_sign) default_arg('S_sign', 1); - assertType(bc, 'cell'); + assertType(bcs, 'cell'); assert(S_sign == 1 || S_sign == -1, 'S_sign must be either 1 or -1'); + verifyBcFormat(bcs, diffOp); + % Setup storage arrays closure = spzeros(size(diffOp)); - penalties = {}; - dataFunctions = {}; - dataParams = {}; + gridData = {}; + symbolicData = {}; - for i = 1:length(bc) - assertType(bc{i}, 'struct'); - [localClosure, penalty] = diffOp.boundary_condition(bc{i}.boundary, bc{i}.type); + % Collect closures, penalties and data + for i = 1:length(bcs) + [localClosure, penalty] = diffOp.boundary_condition(bcs{i}.boundary, bcs{i}.type); closure = closure + localClosure; - if isempty(bc{i}.data) + [ok, isSym, data] = parseData(bcs{i}, penalty, diffOp.grid); + + if ~ok + % There was no data continue end - assertType(bc{i}.data, 'function_handle'); - coord = diffOp.grid.getBoundary(bc{i}.boundary); - assertNumberOfArguments(bc{i}.data, 1+size(coord,2)); - - penalties{end+1} = penalty; - dataFunctions{end+1} = bc{i}.data; - dataParams{end+1} = num2cell(coord ,1); + if isSym + symbolicData{end+1} = data; + else + gridData{end+1} = data; + end end + % Setup penalty function O = spzeros(size(diffOp),1); function v = S_fun(t) v = O; - for i = 1:length(dataFunctions) - v = v + penalties{i}*dataFunctions{i}(t, dataParams{i}{:}); + for i = 1:length(gridData) + v = v + gridData{i}.penalty*gridData{i}.func(t); + end + + for i = 1:length(symbolicData) + v = v + symbolicData{i}.penalty*symbolicData{i}.func(t, symbolicData{i}.coords{:}); end v = S_sign * v; end S = @S_fun; end + +function verifyBcFormat(bcs, diffOp) + for i = 1:length(bcs) + assertType(bcs{i}, 'struct'); + assertStructFields(bcs{i}, {'type', 'boundary'}); + + if ~isfield(bcs{i}, 'data') || isempty(bcs{i}.data) + continue + end + + if ~isa(bcs{i}.data, 'function_handle') + error('bcs{%d}.data should be a function of time or a function of time and space',i); + end + + b = diffOp.grid.getBoundary(bcs{i}.boundary); + + dim = size(b,2); + + if nargin(bcs{i}.data) == 1 + % Grid data (only function of time) + assertSize(bcs{i}.data(0), 1, size(b)); + elseif nargin(bcs{i}.data) ~= 1+dim + error('sbplib:scheme:bcSetup:DataWrongNumberOfArguments', 'bcs{%d}.data has the wrong number of input arguments. Must be either only time or time and space.', i); + end + end +end + +function [ok, isSym, dataStruct] = parseData(bc, penalty, grid) + if ~isfield(bc,'data') || isempty(bc.data) + ok = false; + return + end + ok = true; + + nArg = nargin(bc.data); + + if nArg > 1 + % Symbolic data + isSym = true; + coord = grid.getBoundary(bc.boundary); + dataStruct.penalty = penalty; + dataStruct.func = bc.data; + dataStruct.coords = num2cell(coord, 1); + else + % Grid data + isSym = false; + dataStruct.penalty = penalty; + dataStruct.func = bcs{i}.data; + end +end