annotate +noname/calculateSolution.m @ 107:06c3034966b7 feature/arclen-param

Added and changed some comments. Also my text editor removed a bunch of whitespace.
author Jonatan Werpers <jonatan@werpers.com>
date Tue, 08 Dec 2015 09:50:39 +0100
parents 54d3ab296ba0
children 8298734b1938
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
1 % Calculates the solution of discretization for a given set of ms ts and orders.
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
2 % discrHand -- function handle to a Discretization constructor
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
3 % method -- time stepping method
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
4 % m -- grid parameter
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
5 % order -- order of accuracy of the approximtion
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
6 % T -- time to calculate solution for
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
7 % input paramters m, t, order may all be vectors.
40
54d3ab296ba0 Added Dictionary class. Added string conversions for a bunch of types. Deprecated some replaced functions.
Jonatan Werpers <jonatan@werpers.com>
parents: 36
diff changeset
8 function [] = calculateSolution(filename, discrHand, method, m, T_in, order, force_flag)
32
ddfb98209aa2 Fixed a bunch of problems regarding convergence and saving solutions
Jonatan Werpers <jonatan@werpers.com>
parents: 25
diff changeset
9 default_arg('force_flag',false);
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
10
32
ddfb98209aa2 Fixed a bunch of problems regarding convergence and saving solutions
Jonatan Werpers <jonatan@werpers.com>
parents: 25
diff changeset
11 if exist(filename,'file') && ~force_flag
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
12 fprintf('File ''%s'' already exist.',filename);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
13 do_append = yesnoQuestion('Do you want to append to it?');
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
14 if ~do_append
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
15 fprintf('Exiting...\n');
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
16 return
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
17 end
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
18 end
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
19
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
20 sf = SolutionFile(filename);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
21
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
22
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
23
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
24 orderWidth = findFieldWidth('%d',order);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
25 mWidth = findFieldWidth('%d',m);
40
54d3ab296ba0 Added Dictionary class. Added string conversions for a bunch of types. Deprecated some replaced functions.
Jonatan Werpers <jonatan@werpers.com>
parents: 36
diff changeset
26 TWidth = findFieldWidth('%d',T_in);
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
27
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
28 for i = 1:length(order)
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
29 for j = 1:length(m)
40
54d3ab296ba0 Added Dictionary class. Added string conversions for a bunch of types. Deprecated some replaced functions.
Jonatan Werpers <jonatan@werpers.com>
parents: 36
diff changeset
30 T = sort(T_in); % Make sure times are sorted
54d3ab296ba0 Added Dictionary class. Added string conversions for a bunch of types. Deprecated some replaced functions.
Jonatan Werpers <jonatan@werpers.com>
parents: 36
diff changeset
31
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
32 discr = discrHand(m(j),order(i));
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
33 k_max = discr.getTimestep(method);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
34
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
35 % Do we want to to save the initial conditions?
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
36 if T(1) == 0
20
c7efff913935 Decoupled plotting and timesteppers. Added possibility of different plot_types. Added functions for printing and plotting solution file content.
Jonatan Werpers <jonatan@werpers.com>
parents: 19
diff changeset
37 snapshot = discr.getTimeSnapshot(0);
25
791decafe6e4 Made calculateSolution save the discretization instead of a handle to contructor.
Jonatan Werpers <jonatan@werpers.com>
parents: 20
diff changeset
38 saveToFile(sf, method, order(i), m(j),T(1), snapshot, NaN, NaN, discr);
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
39 T(1) = [];
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
40 end
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
41
36
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
42 % Find out if times to be calulated are integer multiples of the smallest one.
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
43 time_multiples = T/T(1);
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
44
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
45 is_int_multiples = all(time_multiples == int64(time_multiples));
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
46
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
47 if is_int_multiples
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
48 fprintf('Calculating time series in increments\n');
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
49 else
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
50 fprintf('Restarting for each time in timeseries\n');
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
51 end
c6eb3af205c0 Better error handeling in noname.convergence. Better handeling of T=0 in noname.calculateSolution
Jonatan Werpers <jonatan@werpers.com>
parents: 32
diff changeset
52
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
53 % T now contains all the times we need to step to,
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
54 % if T contained 0 it has now been removed.
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
55
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
56 if is_int_multiples
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
57 % Times are integer multiples, we can save time
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
58 [k,N] = alignedTimestep(k_max,T(1));
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
59 ts = discr.getTimestepper(method,k);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
60 runtime = 0;
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
61 for l = 1:length(T)
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
62 end_step = N * time_multiples(l);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
63 fprintf('[order = %-*d, m = %-*d, T = %-*d]: ',orderWidth,order(i),mWidth,m(j),TWidth,T(l));
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
64 clock_start = tic();
20
c7efff913935 Decoupled plotting and timesteppers. Added possibility of different plot_types. Added functions for printing and plotting solution file content.
Jonatan Werpers <jonatan@werpers.com>
parents: 19
diff changeset
65 ts.stepN(end_step-ts.n,true);
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
66 runtime = runtime + toc(clock_start);
20
c7efff913935 Decoupled plotting and timesteppers. Added possibility of different plot_types. Added functions for printing and plotting solution file content.
Jonatan Werpers <jonatan@werpers.com>
parents: 19
diff changeset
67 snapshot = discr.getTimeSnapshot(ts);
25
791decafe6e4 Made calculateSolution save the discretization instead of a handle to contructor.
Jonatan Werpers <jonatan@werpers.com>
parents: 20
diff changeset
68 saveToFile(sf, method, order(i), m(j),T(l), snapshot, runtime, k, discr);
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
69 fprintf('Done! (%.3fs)\n',runtime);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
70 end
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
71 else
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
72 % Times are not interger multiples, we have to start from 0 every time.
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
73 for l = 1:length(T)
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
74 [k,N] = alignedTimestep(k_max,T(l));
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
75 ts = discr.getTimestepper(method,k);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
76 fprintf('[order = %-*d, m = %-*d, T = %-*d]: ',orderWidth,order(i),mWidth,m(j),TWidth,T(l));
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
77 clock_start = tic();
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
78 [v,t] = ts.stepN(N-ts.n,true);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
79 runtime = toc(clock_start);
20
c7efff913935 Decoupled plotting and timesteppers. Added possibility of different plot_types. Added functions for printing and plotting solution file content.
Jonatan Werpers <jonatan@werpers.com>
parents: 19
diff changeset
80 snapshot = discr.getTimeSnapshot(ts);
25
791decafe6e4 Made calculateSolution save the discretization instead of a handle to contructor.
Jonatan Werpers <jonatan@werpers.com>
parents: 20
diff changeset
81 saveToFile(sf, method, order(i), m(j),T(l), snapshot, runtime, k, discr);
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
82 fprintf('Done! (%.3fs)\n',runtime);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
83 end
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
84
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
85 end
32
ddfb98209aa2 Fixed a bunch of problems regarding convergence and saving solutions
Jonatan Werpers <jonatan@werpers.com>
parents: 25
diff changeset
86 sf.stupidSave();
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
87 end
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
88 end
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
89 end
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
90
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
91
25
791decafe6e4 Made calculateSolution save the discretization instead of a handle to contructor.
Jonatan Werpers <jonatan@werpers.com>
parents: 20
diff changeset
92 function saveToFile(sf, method, order, m, T, snapshot, runtime, k, discr)
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
93 key.method = method;
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
94 key.order = order;
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
95 key.m = m;
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
96 key.T = T;
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
97
20
c7efff913935 Decoupled plotting and timesteppers. Added possibility of different plot_types. Added functions for printing and plotting solution file content.
Jonatan Werpers <jonatan@werpers.com>
parents: 19
diff changeset
98 entry.repr = snapshot;
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
99 entry.runtime = runtime;
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
100 entry.k = k;
25
791decafe6e4 Made calculateSolution save the discretization instead of a handle to contructor.
Jonatan Werpers <jonatan@werpers.com>
parents: 20
diff changeset
101 entry.discr = discr;
17
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
102
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
103 sf.store(key,entry);
30ae48efc7ae Added utility function findFiledWidth. Added function for calculating and saving solutions.
Jonatan Werpers <jonatan@werpers.com>
parents:
diff changeset
104 end